miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Manihot esculenta



ABOUT THIS RECORD

ID: MNEST001500
species: Manihot esculenta
miRNA family: miR4249
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATTTGAGAAGTTGATGTG

miRNA*
ATTAATTTTCTGTCTCCGT

mismatches: 4
bulges: 1

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pre-miRNA
CCTCCACTGCTTCTGTGTCTTCATTAATTTTCTGTCTCCGTCCCAGCAAGGGGTGGGTCCCATCCATTTTGGCTTATAGATCATGGGTTTTGATTGGTTG
AATAAGCATGTATCAGCATGATCTAGAGTAGTGAAGTGATGGTATGAATCTCACATGGAATTTGAGAAGTTGATGTGAGAAGGAAGTCTGGAAATG


dot-bracket secondary structure
..((((..((((((...((((((((((((((.((..((((.(((.....)))(((((..(((((..(((..((((.(((((((((....(((((..(((.
....)))....))))))))))))))))))...)))..))))).......))))).))))...)).)))))))))).)))).)))))).))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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